Usage: microcat run-remote [OPTIONS]
Execute the analysis workflow on remote cluster mode
Options:
--jobs INTEGER Cluster job numbers, available on '--run-
remote'
--cluster-engine [generic|slurm|sge|lsf|custom]
Cluster workflow manager engine, now support
generic
--local-cores INTEGER Local cores, available on '--run-remote'
--use-conda Use conda environment
--config TEXT Path of config.yaml
--conda-prefix TEXT Conda environment prefix
--conda-create-envs-only Conda create environments only
--use-singularity Use a singularity container
--list List rule
--singularity-prefix TEXT Singularity images prefix
--task TEXT
-h, --help Show this message and exit.
